Wiki

Version 223 (Etienne Pallier, 03/22/2016 10:52 am)

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h1. Technical Documentation for the PYROS project (FGFT-CC)
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HOWTO Format Redmine Wiki : http://www.redmine.org/projects/redmine/wiki/FrRedmineWikiFormatting
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{{>toc}}
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---
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h2. %{margin-left:0px; font-weight:bold; font-size:25px;  display:block; color:red;}I - TODO%
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 * installation sur windows
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 * gitlab
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 * séparation des BD Django et Pyros
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 * intégration dans Eclipse
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 * Intégration des modules Django déjà développés
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---
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h2. %{margin-left:0px; font-weight:bold; font-size:25px;  display:block; color:red;}I - DATABASE SCHEMA (v0.2.1)%
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{{thumbnail(PYROS_PDM_v021.png, size=300, title=Pyros data model)}}
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---
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h2. %{margin-left:0px; font-weight:bold; font-size:25px;  display:block; color:red;}II - Get the project (from gitlab)%
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h3. Get the project from the terminal
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<pre>
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git clone https://gitlab.irap.omp.eu/epallier/pyros.git PYROS
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(or also : git clone git@gitlab.irap.omp.eu:epallier/pyros.git)
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</pre>
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This creates a PYROS/ folder containing the project (with a .git/ subfolder for synchronization with the git repository)
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If you just wanted a static copy of the project (without synchronization) just remove the .git/ folder :
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<pre>
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$ rm -r .git/
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</pre>
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h3. Get the project from Eclipse
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<pre>
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TODO:
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</pre>
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h2. %{margin-left:0px; font-weight:bold; font-size:25px;  display:block; color:red;}III - INSTALLATION%
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---
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h3. Install MySql (only if necessary)
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 * Linux Ubuntu
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<pre>
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$ sudo apt-get install mysql-server
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$ sudo apt-get install mysql-client
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</pre>
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 * Linux CentOS
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<pre>
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TODO:
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$ sudo yum install mysql
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...
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</pre>
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 * Mac OS X
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Install XAMPP
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(but you could also use the pre-installed Mac OS MySql)
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<pre>
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TODO:
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</pre>
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 * Windows
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Install XAMPP
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<pre>
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TODO:
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</pre>
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---
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h3. Install Python3.5 (only if necessary)
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 * Mac OS X :
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<pre>
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1) Installer MacPort
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(TODO: doc)
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2) Installer le "port" python35
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$ sudo port install python35
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</pre>
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 * Linux (Ubuntu) :
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<pre>
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sudo add-apt-repository ppa:fkrull/deadsnakes
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sudo apt-get update
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sudo apt-get install python3.5
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sudo pip install virtualenv
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</pre>
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 * Windows 10 :
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<pre>
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TODO:
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</pre>
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---
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h3. Create a Python3 virtual environment dedicated to the project (inside the project folder)
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<pre>
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$ mkdir private/
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$ cd private/
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$ which python3.5
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/opt/local/bin/python3.5
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$ virtualenv-3.5 venv_py35_pyros -p /opt/local/bin/python3.5
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=> creates a venv_py35_pyros/ folder inside PYROS/private/
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</pre>
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---
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h3. Activate the python virtual environment (from inside the project)
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<pre>
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$ pwd
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.../PYROS/private
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$ source ./venv_py35_pyros/bin/activate
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$ python -V
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Python 3.5.1
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$ which pip
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.../PYROS/venv_py35_pyros/bin/pip
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Upgrade pip to last version available:
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$ pip install --upgrade pip
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Collecting pip
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  Downloading pip-8.1.1-py2.py3-none-any.whl (1.2MB)
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Installing collected packages: pip
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  Found existing installation: pip 7.1.2
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    Uninstalling pip-7.1.2:
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      Successfully uninstalled pip-7.1.2
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Successfully installed pip-8.1.1
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Upgrade wheel to last version available:
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$ pip install --upgrade wheel
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Collecting wheel
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  Downloading wheel-0.29.0-py2.py3-none-any.whl (66kB)
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Installing collected packages: wheel
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  Found existing installation: wheel 0.24.0
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    Uninstalling wheel-0.24.0:
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      Successfully uninstalled wheel-0.24.0
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Successfully installed wheel-0.29.0
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</pre>
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h3. Install the needed Python packages (from within the virtual environment)
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First, be sure that the virtual environment is activated:
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<pre>
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$ python -V
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Python 3.5.1
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</pre>
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 * *Automatic Installation of all packages*
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<pre>
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$ pip install -r REQUIREMENTS.txt
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</pre>
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 * *Or, manual installation of each package*
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  * *Install Django* :
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<pre>
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$ pip install django
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Collecting django
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  Downloading Django-1.9.4-py2.py3-none-any.whl (6.6MB)
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Installing collected packages: django
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Successfully installed django-1.9.4
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$ pip install django-admin-tools
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Collecting django-admin-tools
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  Downloading django_admin_tools-0.7.2-py2.py3-none-any.whl (289kB)
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Installing collected packages: django-admin-tools
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Successfully installed django-admin-tools-0.7.2
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$ pip install django-debug-toolbar
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Collecting django-debug-toolbar
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  Downloading django_debug_toolbar-1.4-py2.py3-none-any.whl (212kB)
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Requirement already satisfied (use --upgrade to upgrade): Django>=1.7 in ./venv_py35_pyros/lib/python3.5/site-packages (from django-debug-toolbar)
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Collecting sqlparse (from django-debug-toolbar)
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  Downloading sqlparse-0.1.19.tar.gz (58kB)
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Building wheels for collected packages: sqlparse
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  Running setup.py bdist_wheel for sqlparse ... done
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  Stored in directory: /Users/epallier/Library/Caches/pip/wheels/7b/d4/72/6011bb100dd5fc213164e4bbee13d4e03261dd54ce6a5de6b8
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Successfully built sqlparse
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Installing collected packages: sqlparse, django-debug-toolbar
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Successfully installed django-debug-toolbar-1.4 sqlparse-0.1.19
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$ pip install django-extensions
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Collecting django-extensions
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  Downloading django_extensions-1.6.1-py2.py3-none-any.whl (202kB)
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Collecting six>=1.2 (from django-extensions)
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  Downloading six-1.10.0-py2.py3-none-any.whl
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Installing collected packages: six, django-extensions
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Successfully installed django-extensions-1.6.1 six-1.10.0
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$ pip install django-suit
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Collecting django-suit
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  Downloading django-suit-0.2.18.tar.gz (587kB)
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Building wheels for collected packages: django-suit
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  Running setup.py bdist_wheel for django-suit ... done
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  Stored in directory: /Users/epallier/Library/Caches/pip/wheels/12/8b/9a/e02ab0ad9229881638aa040d47d77c8f562999533811927d41
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Successfully built django-suit
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Installing collected packages: django-suit
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Successfully installed django-suit-0.2.18
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</pre>
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  * *Install the web application server gunicorn (will be used in production instead of the dev django web server)* :
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<pre>
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$ pip install gunicorn
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Collecting gunicorn
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  Downloading gunicorn-19.4.5-py2.py3-none-any.whl (112kB)
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Installing collected packages: gunicorn
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Successfully installed gunicorn-19.4.5
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</pre>
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  * *Install the python mysql client*:
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<pre>
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$ pip install mysqlclient
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...
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</pre>
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   * => Issue under Mac OS X:
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<pre>
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$ pip install mysqlclient
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Collecting mysqlclient
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  Downloading mysqlclient-1.3.7.tar.gz (79kB)
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Building wheels for collected packages: mysqlclient
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  Running setup.py bdist_wheel for mysqlclient ... error
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  ----------------------------------------
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  Failed building wheel for mysqlclient
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  Running setup.py clean for mysqlclient
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Failed to build mysqlclient
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Installing collected packages: mysqlclient
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  Running setup.py install for mysqlclient ... done
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Successfully installed mysqlclient-1.3.7
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BOUH !!!
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$ pip install --upgrade wheel
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Collecting wheel
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  Downloading wheel-0.29.0-py2.py3-none-any.whl (66kB)
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Installing collected packages: wheel
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  Found existing installation: wheel 0.24.0
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    Uninstalling wheel-0.24.0:
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      Successfully uninstalled wheel-0.24.0
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Successfully installed wheel-0.29.0
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$ pip uninstall mysqlclient
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$ pip install mysqlclient
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Collecting mysqlclient
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  Using cached mysqlclient-1.3.7.tar.gz
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Building wheels for collected packages: mysqlclient
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  Running setup.py bdist_wheel for mysqlclient ... done
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  Stored in directory: /Users/epallier/Library/Caches/pip/wheels/9b/06/50/d11418c26cf8f2156b13d4363b5afde8e7e75ebb8540d0228d
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Successfully built mysqlclient
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Installing collected packages: mysqlclient
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Successfully installed mysqlclient-1.3.7
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YES !!!
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</pre>
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   * => Issues under Ubuntu:
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<pre>
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$ pip install mysqlclient
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Collecting mysqlclient
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  Downloading mysqlclient-1.3.7.tar.gz (79kB)
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    100% |████████████████████████████████| 81kB 1.5MB/s
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    Complete output from command python setup.py egg_info:
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    /bin/sh: 1: mysql_config: not found
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    Traceback (most recent call last):
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      File "<string>", line 1, in <module>
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    [...]
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    ----------------------------------------
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Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-build-q6j4inuz/mysqlclient/
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BOUH !!!
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$ sudo apt-get install libmysqlclient-dev
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$ pip install mysqlclient
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Collecting mysqlclient
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  Using cached mysqlclient-1.3.7.tar.gz
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Building wheels for collected packages: mysqlclient
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  Running setup.py bdist_wheel for mysqlclient ... error
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    _mysql.c:40:20: fatal error: Python.h: No such file or directory
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     #include "Python.h"
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                        ^
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    compilation terminated.
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    error: command 'x86_64-linux-gnu-gcc' failed with exit status 1
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    ----------------------------------------
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Command "/home/carens_p/pyros/venv_py35_pyros/bin/python3.5 -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-k3klv92j/mysqlclient/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /tmp/pip-gz242xxs-record/install-record.txt --single-version-externally-managed --compile --install-headers /home/carens_p/pyros/venv_py35_pyros/include/site/python3.5/mysqlclient" failed with error code 1 in /tmp/pip-build-k3klv92j/mysqlclient/
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BOUH !!!
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$ sudo apt-get install python3.5-dev
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$ pip install mysqlclient
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YES !!!
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</pre>
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---
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h3. Test the project
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<pre>
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$ cd src/
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$ ./manage.py runserver
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(or gunicorn pyros.wsgi)
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==> http://localhost:8000
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...
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...
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Ctrl-c
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</pre>
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---
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h3. Replace the default pyrosapp models.py with the inspectdb generated one
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From src/ :
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<pre>
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$ mv models.py pyrosapp/
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</pre>
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Add pyrosapp to the project's applications :
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Edit src/pyros/settings.py
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<pre>
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INSTALLED_APPS = [
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    'django.contrib.admin',
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    'django.contrib.auth',
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    'django.contrib.contenttypes',
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    'django.contrib.sessions',
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    'django.contrib.messages',
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    'django.contrib.staticfiles',
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    'pyrosapp',
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]
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</pre>
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---
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h3. Fix and improve the pyrosapp models.py file (generated by inspectdb)
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Once models.py file generated, we need to delete the database and create an empty one :
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<pre>
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$ mysql -u root [-p (if password needed)]
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mysql> DROP DATABSE pyros
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mysql> CREATE SCHEMA IF NOT EXISTS 'pyros' DEFAULT CHARACTER SET utf8;
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</pre>
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Then edit pyrosapp/models.py :
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 * Change 'managed = False' to 'managed = True' for every model
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 * Change classes names to CamelCase (do not change the 'db_table = ...' lines). *Be careful* : it is needed to change all occurences :
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    * NrtAlanysis
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    * ScheduleHistory
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    * ScientificProgram
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    * SequenceType
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    * SiteWatch
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    * SiteWatchHistory
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    * StrategyObs
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    * UserLevel
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    * WeatherWatch
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    * WeatherWatchHistory
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 * Change the deleting mode from 'models.DO_NOTHING' to 'models.CASCADE' for the following foreign keys :
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    * Image.plan
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    * Plan.album
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    * Album.sequence
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    * Sequence.request
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 * Change the 'ForeignKey' liaisons to 'OneToOneField' liaisons (just replace ForeignKey by OneToOneField), and change deleting mode to 'models.CASCADE' for the following foreign keys :
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    * Alert.request
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    * Detector.device
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    * Filter.device
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    * Telescope.device
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 * We need to redefine many to many relationships for the following classes :
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    * User - ScientificProgram :
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        * add 'users = models.ManyToManyField('User')' in ScientificProgram class
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        * delete UserHasScientificProgram class
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    * Sequence - ScheduleHistory
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        * add 'sequences = models.ManyToManyField('Sequence')' in ScheduleHistory class
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        * delete ScheduleHasSequences class
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 * For each ForeignKey and ManyToManyField creation in models.py, add the 'related_name=[...]' named parameter, as in the following examples :
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<pre>
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class Sequence(models.Model):
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    request = models.ForeignKey(Request, models.CASCADE, related_name="sequences")
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    sequencetype = models.ForeignKey('SequenceType', models.DO_NOTHING, related_name="sequences")
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    schedule = models.ForeignKey(Schedule, models.DO_NOTHING, related_name="sequences")
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    name = models.CharField(max_length=45, blank=True, null=True)
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    desc = models.TextField(blank=True, null=True)
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    ...
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class ScheduleHistory(models.Model):
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    sequences = models.ManyToManyField('Sequence', related_name='schedulehistorys')
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    created = models.DateTimeField(blank=True, null=True)
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    ...
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</pre>
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 * Finally apply modifications to the database :
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<pre>
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$ pwd
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.../PYROS/src
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$ python manage.py makemigrations pyrosapp
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$ python manage.py migrate
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</pre>
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---
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h2. %{margin-left:0px; font-weight:bold; font-size:25px;  display:block; color:red;}IV - CONFIGURATION of the Django Back Office (administration interface)%
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---
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h3. Back Office setup
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 * Prerequisites in src/pyros/settings.py :
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    * INSTALLED_APPS must (at least) contain :
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        * django.contrib.admin
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        * django.contrib.auth
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        * django.contrib.contenttypes
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        * django.contrib.sessions
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    * MIDDLEWARES must (at least) contain :
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        * django.contrib.sessions.middleware.SessionMiddleware
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        * django.middleware.common.CommonMiddleware
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        * django.contrib.auth.middleware.AuthenticationMiddleware
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 * At least one 'python manage.py migrate' must have been executed
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 * Create a superuser for the administration :
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<pre>
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$ python manage.py createsuperuser
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</pre>
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* For each app of the project, fill the admin.py file :
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<pre>
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from django.contrib import admin
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from app.models import Model1, Model2
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admin.site.register(Model1)
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admin.site.register(Model2)
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</pre>
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*Reminder* : each application must be registered in the settings.py INSTALLED_APPS variable.
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* For each model in models.py, add a '__str__()' method in order to identify the object on the back office. Example :
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521 157 Paul Carensac
<pre>
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class UserLevel(models.Model):
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    name = models.CharField(max_length=45, blank=True, null=True)
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    desc = models.TextField(blank=True, null=True)
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    priority = models.IntegerField(blank=True, null=True)
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    quota = models.FloatField(blank=True, null=True)
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    class Meta:
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        managed = True
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        db_table = 'userlevel'
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    def __str__(self):
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        return (str(self.name))
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</pre>
535 157 Paul Carensac
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*Naming convention* : Use self.name when possible, the creation time/date otherwise. Example :
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538 159 Paul Carensac
<pre>
539 159 Paul Carensac
class SiteWatch(models.Model):
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    updated = models.DateTimeField(blank=True, null=True)
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    lights = models.CharField(max_length=45, blank=True, null=True)
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    dome = models.CharField(max_length=45, blank=True, null=True)
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    doors = models.CharField(max_length=45, blank=True, null=True)
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    temperature = models.FloatField(blank=True, null=True)
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    class Meta:
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        managed = True
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        db_table = 'sitewatch'
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    def __str__(self):
551 160 Paul Carensac
        return (str(self.updated))
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</pre>
553 173 Etienne Pallier
554 211 Paul Carensac
---
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556 211 Paul Carensac
h3. Adaptation of the one-to-many and many-to-many display
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* The one-to-many relationships are the following (One.many format) :
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    * Schedule.sequences
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    * Request.sequences
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    * Sequence.albums
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    * Album.plans
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    * Plan.images
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    * Telescope.detectors
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    * Detector.filters
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    * NrtAnalysis.images
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    * Filter.plans
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    * Detector.albums
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    * UserLevel.users
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    * Country.users
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    * ScientificProgram.requests
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    * User.requests
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    * StrategyObs.alerts
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    * SequenceType.sequences
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* For each "many", create a new class in admin.py just after the imports, following these examples :
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579 211 Paul Carensac
<pre>
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For Schedule.sequences, Request.sequences and Sequentype.sequences, we will need :
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class SequenceInline(admin.TabularInline):
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    model = Sequence
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    fields = ("name",)
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    show_change_link = True
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589 211 Paul Carensac
For Sequence.albums and Detector.albums, we will need :
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class AlbumInline(admin.TabularInline):
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    model = Album
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    fields = ("name",)
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    show_change_link = True
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For StrategyObs.alerts, we will need :
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class AlertInline(admin.TabularInline):
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    model = Alert
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    fields = ("request.name",) # there is no 'name' attribute in the Alert model
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    show_change_link = True
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</pre>
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* For each "One", declare a new class in admin.py, just after the "Inlines" class declaration, as done in the following examples :
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<pre>
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For Request.sequences :
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class RequestAdmin(admin.ModelAdmin):
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    inlines = [
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	SequenceInline,
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    ]
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For Detector.filters and Detector.albums :
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618 222 Paul Carensac
class DetectorAdmin(admin.ModelAdmin):
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    inlines = [
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	FilterInline,
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        AlbumInline,
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    ]
623 222 Paul Carensac
624 222 Paul Carensac
</pre>
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626 222 Paul Carensac
* The many-to-many relationships are the following :
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    * ScientificProgram - User
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    * ScheduleHistory - Sequence
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630 222 Paul Carensac
* For each many-to-many relationship, declare a new "Inline" class in admin.py just after the imports, like this :
631 222 Paul Carensac
632 222 Paul Carensac
<pre>
633 222 Paul Carensac
For ScientificProgram - User :
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635 222 Paul Carensac
class UserAndSPInline(admin.TabularInline):
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    model = ScientificProgram.users.through
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638 222 Paul Carensac
639 222 Paul Carensac
For ScheduleHistory - Sequence
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641 222 Paul Carensac
class SequenceAndSHInline(admin.TabularInline):
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    model = ScheduleHistory.sequences.through
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644 222 Paul Carensac
</pre>
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646 222 Paul Carensac
+Note :+ The order in the line "model = ScientificProgram.users.through" is very important : the first model (ScientificProgram) is the one in which is declared the ManyToManyField relationship.
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648 1 Etienne Pallier
h2. %{margin-left:0px; font-weight:bold; font-size:25px;  display:block; color:red;}V - INSTALLATION FROM THE BEGINNING (for dev only)%
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650 205 Etienne Pallier
h3. Install MySql (only if necessary)
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652 205 Etienne Pallier
See above in III-Installation
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https://projects.irap.omp.eu/projects/pyros/wiki/Wiki#III-INSTALLATION
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655 207 Etienne Pallier
656 207 Etienne Pallier
---
657 207 Etienne Pallier
658 208 Etienne Pallier
h3. Create the database (from sql script generated with Mysql Workbench)
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 * Linux and Mac OS X:
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<pre>
662 207 Etienne Pallier
One liner:
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$ mysql -u root < pyros_create.sql
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665 207 Etienne Pallier
Or :
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$ mysql -u root
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mysql> create database pyros;
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mysql> use pyros;
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mysql> source pyros_create.sql;
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671 207 Etienne Pallier
(
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TODO:
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mysql> grant all on pyros.* to pyros@localhost identified by ‘pyros’;)
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mysql> flush privileges;
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)
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</pre>
677 207 Etienne Pallier
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679 207 Etienne Pallier
 * Windows:
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<pre>
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TODO: Use phpmyadmin ?
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</pre>
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h3. Install Python3.5 (only if necessary)
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686 205 Etienne Pallier
See above in III-Installation
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https://projects.irap.omp.eu/projects/pyros/wiki/Wiki#III-INSTALLATION
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h3. Create the project structure
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<pre>
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$ mkdir PYROS
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</pre>
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Example of a good organization :
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698 210 Etienne Pallier
1 project = N applis
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1 appli = N models
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A! L’appli est à côté du projet, PAS DEDANS,
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cela facilite la REUTILISATION
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(an appli can be part of many projects => reuse)
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1 appli = 1 Python module, organized for Django, by default = appli web (but not mandatory)
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705 210 Etienne Pallier
<pre>
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MYPROJECT/
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	REQUIREMENTS.txt
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	src/
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		myproject/
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		appli1/
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		appli2/
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		appliN/
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	public/
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		static/
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	private/
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		venv_py35_pyros/
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</pre>
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Set needed folders:
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<pre>
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$ cd PYROS/
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$ mkdir private public
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$ mkdir public/static
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</pre>
731 210 Etienne Pallier
732 210 Etienne Pallier
733 210 Etienne Pallier
734 210 Etienne Pallier
---
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736 205 Etienne Pallier
h3. Create a Python3 virtual environment dedicated to the project (inside the project folder)
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738 205 Etienne Pallier
See above in III-Installation
739 205 Etienne Pallier
https://projects.irap.omp.eu/projects/pyros/wiki/Wiki#III-INSTALLATION
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741 205 Etienne Pallier
h3. Activate the Python virtual environment (from inside the project)
742 205 Etienne Pallier
743 205 Etienne Pallier
See above in III-Installation
744 205 Etienne Pallier
https://projects.irap.omp.eu/projects/pyros/wiki/Wiki#III-INSTALLATION
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h3. Install the needed Python packages (from within the virtual environment)
747 205 Etienne Pallier
748 1 Etienne Pallier
See above in III-Installation
749 213 Etienne Pallier
https://projects.irap.omp.eu/projects/pyros/wiki/Wiki#Install-the-needed-Python-packages-from-within-the-virtual-environment
750 213 Etienne Pallier
(cf manual installation)
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h3. Create a Django project named PYROS
753 1 Etienne Pallier
754 215 Etienne Pallier
<pre>
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756 215 Etienne Pallier
From inside the project:
757 215 Etienne Pallier
$ pwd
758 215 Etienne Pallier
.../PYROS/
759 215 Etienne Pallier
760 215 Etienne Pallier
$ django-admin startproject pyros
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762 215 Etienne Pallier
Rename the project folder "pyros/" as "src/"
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764 215 Etienne Pallier
$ mv pyros src
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766 215 Etienne Pallier
We have then this architecture:
767 215 Etienne Pallier
768 215 Etienne Pallier
PYROS
769 215 Etienne Pallier
├── REQUIREMENTS.txt
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├── private
771 215 Etienne Pallier
│   └── venv_py35_pyros
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├── public
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│   └── static
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├── src
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│   ├── manage.py
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│   ├── pyros
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│   │   ├── __init__.py
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│   │   ├── settings.py
779 215 Etienne Pallier
│   │   ├── urls.py
780 215 Etienne Pallier
│   │   └── wsgi.py
781 215 Etienne Pallier
782 215 Etienne Pallier
</pre>
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784 215 Etienne Pallier
785 215 Etienne Pallier
786 215 Etienne Pallier
787 215 Etienne Pallier
---
788 205 Etienne Pallier
789 205 Etienne Pallier
h3. Test the project
790 205 Etienne Pallier
791 205 Etienne Pallier
See above in III-Installation
792 205 Etienne Pallier
https://projects.irap.omp.eu/projects/pyros/wiki/Wiki#III-INSTALLATION
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794 205 Etienne Pallier
h3. The Web server
795 205 Etienne Pallier
796 217 Etienne Pallier
797 217 Etienne Pallier
Apache : gère tous les fichiers statiques (images, html…), et délègue les fichiers python au serveur django (par défaut)
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799 217 Etienne Pallier
Le fichier pyros/urls.py prend le relai pour tout ce qui est django
800 217 Etienne Pallier
801 217 Etienne Pallier
Le moteur web django sera soit du wsgi soit du unicorn
802 217 Etienne Pallier
803 217 Etienne Pallier
Par défaut, 1 seul worker, mais on peut en configurer plusieurs, l’idéal étant de faire "nb coeurs + 1" 
804 217 Etienne Pallier
(le worker maître qui fait le dispatching aux autres)
805 217 Etienne Pallier
806 217 Etienne Pallier
Frontend : Apache ou Ngininx
807 217 Etienne Pallier
808 217 Etienne Pallier
Backend : gunicorn (gère facilement des workers) ou uwsgi
809 217 Etienne Pallier
810 217 Etienne Pallier
<pre>
811 217 Etienne Pallier
$ gunicorn pyros.wsgi
812 217 Etienne Pallier
(à la place de manage runserver => A EVITER EN PROD)
813 217 Etienne Pallier
814 217 Etienne Pallier
Ou encore:
815 217 Etienne Pallier
816 217 Etienne Pallier
$ gunicorn --workers 5 library.wsgi
817 217 Etienne Pallier
</pre>
818 217 Etienne Pallier
819 217 Etienne Pallier
---
820 217 Etienne Pallier
821 219 Etienne Pallier
h3. Set the database engine as MySql
822 219 Etienne Pallier
823 219 Etienne Pallier
Edit src/pyros/settings.py
824 219 Etienne Pallier
825 219 Etienne Pallier
<pre>
826 219 Etienne Pallier
DATABASES = {
827 219 Etienne Pallier
    'default': {
828 219 Etienne Pallier
        'ENGINE': 'django.db.backends.mysql',
829 219 Etienne Pallier
        'NAME': 'pyros',
830 219 Etienne Pallier
        'USER': 'root',
831 219 Etienne Pallier
        'PASSWORD': ''
832 219 Etienne Pallier
    }
833 219 Etienne Pallier
}
834 219 Etienne Pallier
</pre>
835 219 Etienne Pallier
836 219 Etienne Pallier
---
837 205 Etienne Pallier
838 221 Etienne Pallier
h3. Import the database into Django (with inspectdb)
839 221 Etienne Pallier
840 221 Etienne Pallier
From src/ :
841 221 Etienne Pallier
842 221 Etienne Pallier
<pre>
843 221 Etienne Pallier
$ ./manage.py inspectdb > models.py
844 221 Etienne Pallier
</pre>
845 221 Etienne Pallier
846 221 Etienne Pallier
Issue on Mac OS X:
847 221 Etienne Pallier
<pre>
848 221 Etienne Pallier
Traceback (most recent call last):
849 221 Etienne Pallier
  File "/Users/epallier/Documents/_W_more/PROJECTS/GFT/SOFT/PYROS/pyros/venv_py35_pyros/lib/python3.5/site-packages/django/db/backends/mysql/base.py", line 25, in <module>
850 221 Etienne Pallier
    import MySQLdb as Database
851 221 Etienne Pallier
  File "/Users/epallier/Documents/_W_more/PROJECTS/GFT/SOFT/PYROS/pyros/venv_py35_pyros/lib/python3.5/site-packages/MySQLdb/__init__.py", line 19, in <module>
852 221 Etienne Pallier
    import _mysql
853 221 Etienne Pallier
ImportError: dlopen(/Users/epallier/Documents/_W_more/PROJECTS/GFT/SOFT/PYROS/pyros/venv_py35_pyros/lib/python3.5/site-packages/_mysql.cpython-35m-darwin.so, 2): Library not loaded: libmysqlclient.18.dylib
854 221 Etienne Pallier
  Referenced from: /Users/epallier/Documents/_W_more/PROJECTS/GFT/SOFT/PYROS/pyros/venv_py35_pyros/lib/python3.5/site-packages/_mysql.cpython-35m-darwin.so
855 221 Etienne Pallier
  Reason: image not found
856 221 Etienne Pallier
857 221 Etienne Pallier
=> BOUH !!!
858 221 Etienne Pallier
859 221 Etienne Pallier
LA SOLUTION EST ICI : http://stackoverflow.com/questions/6383310/python-mysqldb-library-not-loaded-libmysqlclient-18-dylib
860 221 Etienne Pallier
861 221 Etienne Pallier
Il suffit de faire ceci:
862 221 Etienne Pallier
863 221 Etienne Pallier
$ sudo mkdir -p /usr/local/lib   
864 221 Etienne Pallier
$ sudo ln -s /Applications/XAMPP/xamppfiles/lib/libmysql* /usr/local/lib/
865 221 Etienne Pallier
866 221 Etienne Pallier
Mais on peut aussi faire ceci:
867 221 Etienne Pallier
868 221 Etienne Pallier
Okay, so the offending file is /Users/epallier/Documents/_W_more/PROJECTS/GFT/SOFT/PYROS/pyros/venv_py35_pyros/lib/python3.5/site-packages/_mysql.cpython-35m-darwin.so
869 221 Etienne Pallier
870 221 Etienne Pallier
Next, figure out where _mysql.so thinks it should find libmysqlclient.18.dylib:
871 221 Etienne Pallier
872 221 Etienne Pallier
$ otool -L /Users/epallier/Documents/_W_more/PROJECTS/GFT/SOFT/PYROS/pyros/venv_py35_pyros/lib/python3.5/site-packages/_mysql.cpython-35m-darwin.so
873 221 Etienne Pallier
/Users/epallier/Documents/_W_more/PROJECTS/GFT/SOFT/PYROS/pyros/venv_py35_pyros/lib/python3.5/site-packages/_mysql.cpython-35m-darwin.so:
874 221 Etienne Pallier
	libmysqlclient.18.dylib (compatibility version 18.0.0, current version 18.0.0)
875 221 Etienne Pallier
...
876 221 Etienne Pallier
877 221 Etienne Pallier
So, it's looking for libmysqlclient.18.dylib with no path information, let's fix that:
878 221 Etienne Pallier
879 221 Etienne Pallier
$ locate libmysqlclient.18.dylib
880 221 Etienne Pallier
/Applications/XAMPP/xamppfiles/lib/libmysqlclient.18.dylib
881 221 Etienne Pallier
/Library/SystemMigration/History/Migration-68137DFB-CB6A-4FBB-81E2-11BDB5D01E48/QuarantineRoot/usr/lib/libmysqlclient.18.dylib
882 221 Etienne Pallier
883 221 Etienne Pallier
$ sudo install_name_tool -change libmysqlclient.18.dylib /Applications/XAMPP/xamppfiles/lib/libmysqlclient.18.dylib /Users/epallier/Documents/_W_more/PROJECTS/GFT/SOFT/PYROS/pyros/venv_py35_pyros/lib/python3.5/site-packages/_mysql.cpython-35m-darwin.so
884 221 Etienne Pallier
885 221 Etienne Pallier
Now _mysql.so knows the full path to the library and everything works, regardless of environment variables.
886 221 Etienne Pallier
887 221 Etienne Pallier
$ otool -L /Users/epallier/Documents/_W_more/PROJECTS/GFT/SOFT/PYROS/pyros/venv_py35_pyros/lib/python3.5/site-packages/_mysql.cpython-35m-darwin.so
888 221 Etienne Pallier
/Users/epallier/Documents/_W_more/PROJECTS/GFT/SOFT/PYROS/pyros/venv_py35_pyros/lib/python3.5/site-packages/_mysql.cpython-35m-darwin.so:
889 221 Etienne Pallier
	/Applications/XAMPP/xamppfiles/lib/libmysqlclient.18.dylib (compatibility version 18.0.0, current version 18.0.0)
890 221 Etienne Pallier
...
891 221 Etienne Pallier
892 221 Etienne Pallier
$ ./manage.py inspectdb > models.py
893 221 Etienne Pallier
894 221 Etienne Pallier
=> YES !!!
895 221 Etienne Pallier
</pre>
896 221 Etienne Pallier
897 221 Etienne Pallier
898 221 Etienne Pallier
---
899 205 Etienne Pallier
900 205 Etienne Pallier
h3. Create a Django application pyrosapp
901 205 Etienne Pallier
902 205 Etienne Pallier
h3. Replace the default pyrosapp models.py with the inspectdb generated one
903 205 Etienne Pallier
904 205 Etienne Pallier
h3. Fix and improve the pyrosapp models.py file (generated by inspectdb)
905 205 Etienne Pallier
906 201 Etienne Pallier
h3. Set Requirements
907 201 Etienne Pallier
908 201 Etienne Pallier
<pre>
909 201 Etienne Pallier
$ pip freeze > REQUIREMENTS.txt
910 201 Etienne Pallier
</pre>
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912 182 Etienne Pallier
913 1 Etienne Pallier
---
914 203 Etienne Pallier
915 203 Etienne Pallier
h3. Initialize the git repository
916 203 Etienne Pallier
917 203 Etienne Pallier
*Git global setup:*
918 203 Etienne Pallier
919 203 Etienne Pallier
<pre>
920 203 Etienne Pallier
$ git config --global user.name "Etienne Pallier"
921 203 Etienne Pallier
$ git config --global user.email "etienne.pallier@irap.omp.eu"
922 203 Etienne Pallier
923 203 Etienne Pallier
$ cat ~/.gitconfig 
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[user]
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	name = Etienne Pallier
926 203 Etienne Pallier
	email = epallier@irap.omp.eu
927 203 Etienne Pallier
[http]
928 203 Etienne Pallier
	sslVerify = false
929 203 Etienne Pallier
</pre>
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931 203 Etienne Pallier
932 203 Etienne Pallier
*Create a new repository:*
933 203 Etienne Pallier
934 203 Etienne Pallier
<pre>
935 203 Etienne Pallier
$ cd PYROS/
936 203 Etienne Pallier
937 203 Etienne Pallier
Define files and folders to be ignored:
938 203 Etienne Pallier
$ vi .gitignore
939 203 Etienne Pallier
.DS_Store
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private
941 203 Etienne Pallier
__pycache__
942 203 Etienne Pallier
943 203 Etienne Pallier
$ touch README.md
944 203 Etienne Pallier
945 203 Etienne Pallier
$ git add README.md
946 203 Etienne Pallier
947 203 Etienne Pallier
$ git commit -m "first commit"
948 203 Etienne Pallier
949 203 Etienne Pallier
$ git remote add origin https://gitlab.irap.omp.eu/epallier/pyros.git
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951 203 Etienne Pallier
$ git push -u origin master
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953 203 Etienne Pallier
$ git add .
954 203 Etienne Pallier
955 203 Etienne Pallier
( if you want to be sure to add ALL files: 
956 203 Etienne Pallier
$ git add -A
957 203 Etienne Pallier
)
958 203 Etienne Pallier
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( if you wanted to remove added files, just type:
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$ git reset HEAD
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)
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$ git commit -m "first full project commit"
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$ git push -u origin master
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Counting objects: 43, done.
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Delta compression using up to 4 threads.
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Compressing objects: 100% (41/41), done.
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Writing objects: 100% (43/43), 575.13 KiB ö 0 bytes/s, done.
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Total 43 (delta 2), reused 0 (delta 0)
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To https://gitlab.irap.omp.eu/epallier/pyros.git
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   9c7128c..64501c9  master -> master
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Branch master set up to track remote branch master from origin.
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$ git status
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On branch master
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Your branch is up-to-date with 'origin/master'.
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nothing to commit, working directory clean
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</pre>